Perttu Permi group leader
National biological NMR center
Viikinkaari 1 (Biocenter 3)
P.O. Box 65
00014 University of Helsinki
Finland
Tel: +358 9 191 58940
Fax: +358 9 191 59541
perttu-dot-permi-at-helsinki-dot-fi
Clean HMBC pulse seqence: suppression of strong-coupling induced artifacts in HMBC spectra
Clean HMBC is an HMBC experiment which features improved suppression of one-bond correlations by eliminating artefacts arising due to strong coupling.
τ and τi's are set for 1JCH with exact delay timing depending on the degree of filtering desired. Δ is the polarization transfer delay for nJCH and δ is a gradient delay. Echo/antiecho spectra are recorded and the non-destructive filter is co-added on the fly so processing is identical to the standard HMBC experiment. The order of the initial and terminal low pass J filter (LPJF) add up to give the total order of filtration. The sensitivity of long-range correlations are unaffected by clean HMBC filtering mechanism.
Recommended phase cycle is an even number of scans out of:
φ1={x,-x,-x,x}, φ2={x,x,4(-x),x,x}, φ3={4(x),4(y),4(-x),4(-y)}, and φrec={x,-x}.
A minimum of 4 scans are required to obtain a 2nd order terminal LPJF.
Spectral excerpts from the bulk region of mannose recorded at 500 MHz:
1D traces of the example shown above.
Standard HMBC (upper), Clean HMBC (middle), and signals suppressed by the novel filter implementation (lower).
Reference:
Würtz P, Permi P, Nielsen NC, Sørensen OW.
Clean HMBC: Suppression of strong-coupling induced artifacts in HMBC spectra.
J. Magn. Reson. 2008, 194(1):89-98. [PUBMED]
Clean HMBC: Suppression of strong-coupling induced artifacts in HMBC spectra
Download the complete package: cleanHMBC.tgz
Installation instructions:
Please read the disclaimer before using the sequence. For usage/processing refer to the manual page.
List of files:
'
readme
DISCLAIMER
cleanHMBC.tar
maclib/cleanHMBC
manual/cleanHMBC
psglib/cleanHMBC.c
parlib/cleanHMBC.par/procpar
parlib/cleanHMBC.par/text
Installation setup
- Login at the user account in which the installation should be carried out.
- Save the cleanHMBC.tgz file at a location with write permission for the user who is carrying out the installation.
- Unpack the file with the command: tar xzvf cleanhmbc.tgz
- Run the install script by typing ./install
Running and processing experiments
- Load the parameter file.
- Set relevant parameters such as pulse widths, power levels and low pass J filtering interval (specified in manual).
- Adjust receiver gain and start experiment.
- Standard processing by wft2da.
For questions or requests please contact Dr. Perttu Permi, perttu.permi
helsinki.fi